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甲型H1N1流感病毒神经氨酸酶基因进化分析

Genetic characterization of neuraminidase gene of pandemic influenza A(H1N1) virus in Shandong province

  • 摘要: 目的 探讨2009年山东省甲型H1N1流感病毒神经氨酸酶(neuram inidase,NA)基因的进化及NA基因编码蛋白抗原性、酶活性位点、糖基化位点变异情况.方法 对山东省分离的20株甲型H1N1流感病毒的NA基因序列,用MEGA 4.0软件进行基因进化分析和氨基酸序列分析.结果 山东省2009年9月-2010年1月分离的20株甲型H1N1流感病毒NA基因的同源性均>99.2%,其中有4株的同源性为100%;与疫苗株A-California-07-2009(H1N1)、国内推荐株A-Sichuan-SWL1-2009(H1N1)的同源性分别为99.1%~99.5%和99.1%~99.6%;有13个神经氨酸酶基因的氨基酸发生了替换,为21、23、25、42、43、60、76、94、106、122、248、307和351位;未发生神经氨酸酶蛋白275位H-Y的替换.结论 山东省分离的甲型H1N1流感病毒NA基因高度保守,潜在抗原位点氨基酸分布相同;所有毒株的酶活性中心位点以及糖基化位点均高度保守;所有测定样本均未发生对达菲类药物的耐药性突变.

     

    Abstract: Objective To investigate the genetic characterization(evolution,antigenicity,enzymatically active site and glycosylation site) of the neuraminidase(NA) gene of the pandemic influenza virus A(H1N1) in Shandong province.Methods Genetic evolution and amino acid substitutions of the 20 NA gene sequences of pandemic influenza virus A(H1N1) isolated in Shandong province were analyzed with MEGA 4.0 software.Results The pandemic influenza A(H1N1) viruses shared a homology of more than 99.2%.Phylogenetic analysis for neuram in idase showed that the strain related to the vaccine strain(A California 07-2009H1N1) and the reference strain in China(A Sichuan 1-2009H1N1), with 99.1%-99.5% and 99.1%-99.6% of sequence identity, respectively.The NA amino positions were changed at 21, 23, 25, 42, 43, 60,76, 94, 106, 122, 248, 307, and 351.No mutation of 275 in NA protein was found.Conclusion The NA gene of the pandemic influenza A(H1N1) virus in Shandong province were highly homologo u.s Amino acid residue sat the enzym atically active sites and the glycosylation sites was strictly conservative in all influenza virus strains.All the samples are sensitivity to oseltamivir.

     

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